Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Digestive tract
Cell type
Stomach
MeSH Description
An organ of digestion situated in the left upper quadrant of the abdomen between the termination of the ESOPHAGUS and the beginning of the DUODENUM.

Attributes by original data submitter

Sample

sex
female
tissue
stomach
lab
Richard Myers, HAIB
sample_type
tissue
age
53 year
donor ID
ENCDO793LXB
dev_stage
adult

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
extraction method: see document

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
46116563
Reads aligned (%)
92.8
Duplicates removed (%)
5.0
Number of peaks
1455 (qval < 1E-05)

hg19

Number of total reads
46116563
Reads aligned (%)
91.9
Duplicates removed (%)
5.5
Number of peaks
847 (qval < 1E-05)

Base call quality data from DBCLS SRA